species:   Scscl
pid:       PID1711
parent:    Ssc-milR-187
paralog:   
locus:     NW_001820833.1:556659-556741
matures:   ['UGGCGAAAUAGGGCUGCCUU', 'GGUUUCAAUUUGGCCAU']
srr:       SRR12527897
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527897.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527897.cram NW_001820833.1:556659-556741

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

        **********************                          *******************        
AGAAGAGGAUUGGCGAAAUAGGGCUGCCUUGGGGGAUCCCGGUAUUGAUCGGUUUGAAGGUUUCAAUUUGGCCAUCGAAUGAG
.......(((.(((.((((.(((..(((((.(((....(((((....)))))))).)))))))).)))).)))))).......
----------UGGCGAAAUAGGGCUGCCUU----------------------------------------------------- l=20 a=0 c
----------------------------------------------------------GGUUUCAAUUUGGCCAU-------- l=17 a=0 c*
----------UGGCGAAAUAGGGCUGCCUU----------------------------------------------------- l=20 a=0 ma
----------------------------------------------------------GGUUUCAAUUUGGCCAU-------- l=17 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
